Detailed information of evm.model.contig_81734.2 in Platygyra sinensis

Genomic Location: contig_81734:1187...16837
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →
ubiquitinUbiquitin familyDomainInterproscan
PF12057
all species →
BAG6BCL2-associated athanogene 6DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →
DomainUbiquitin-like domainInterproscan
IPR019954
all species →
Conserved_siteUbiquitin conserved siteInterproscan
IPR029071
all species →
Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR021925
all species →
DomainLarge proline-rich protein BAG6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15204
all species →
LARGE PROLINE-RICH PROTEIN BAG6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0030433
all species →
Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031593
all species →
Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0051787
all species →
Molecular Functionmisfolded protein bindingInterproscan
GO:0071818
all species →
Cellular ComponentBAT3 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_81734.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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