Gene detail

Detailed information of evm.model.contig_81794.2 in Platygyra sinensis

Genomic Location: contig_81794:5224...13974
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02347 all species →	GDC-P	Glycine cleavage system P-protein	Domain	Interproscan
PF00808 all species →	CBFD_NFYB_HMF	Histone-like transcription factor (CBF/NF-Y) and archaeal histone	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009072 all species →	Homologous_superfamily	Histone-fold	Interproscan
IPR049315 all species →	Domain	Glycine cleavage system P-protein, N-terminal domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR020581 all species →	Family	Glycine cleavage system P protein	Interproscan
IPR003958 all species →	Domain	Transcription factor CBF/NF-Y/archaeal histone domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11773 all species →	GLYCINE DEHYDROGENASE, DECARBOXYLATING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046982 all species →	Molecular Function	protein heterodimerization activity	Interproscan
GO:0004375 all species →	Molecular Function	glycine dehydrogenase (decarboxylating) activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005960 all species →	Cellular Component	glycine cleavage complex	Interproscan
GO:0006546 all species →	Biological Process	glycine catabolic process	Interproscan
GO:0016594 all species →	Molecular Function	glycine binding	Interproscan
GO:0019464 all species →	Biological Process	glycine decarboxylation via glycine cleavage system	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_81794.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.