Gene detail

Detailed information of evm.model.contig_83758.1 in Platygyra sinensis

Genomic Location: contig_83758:122...9765
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan
PF09992 all species →	NAGPA	Phosphodiester glycosidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR042635 all species →	Family	MEGF10/SREC1/2-like	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR018711 all species →	Domain	Phosphodiester glycosidase	Interproscan
IPR001774 all species →	Domain	Delta/Serrate/lag-2 (DSL) protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24043 all species →	SCAVENGER RECEPTOR CLASS F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005044 all species →	Molecular Function	scavenger receptor activity	Interproscan
GO:0007154 all species →	Biological Process	cell communication	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_83758.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.