Gene detail

Detailed information of evm.model.contig_83870.2 in Platygyra sinensis

Genomic Location: contig_83870:3264...4178
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06544 all species →	Prp3_C	Small nuclear ribonucleoprotein Prp3, C-terminal domain	Domain	Interproscan
PF05773 all species →	RWD	RWD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR006575 all species →	Domain	RWD domain	Interproscan
IPR010541 all species →	Domain	Small nuclear ribonucleoprotein Prp3, C-terminal domain	Interproscan
IPR017359 all species →	Family	Phomoidride biosynthesis cluster protein F-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15955 all species →	RWD DOMAIN CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_83870.2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.