Gene detail

Detailed information of evm.model.contig_83999.4 in Platygyra sinensis

Genomic Location: contig_83999:27475...31149
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17874 all species →	TPR_MalT	MalT-like TPR region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036834 all species →	Homologous_superfamily	Bcl-2-like superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051787 all species →	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR002475 all species →	Family	Bcl2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042981 all species →	Biological Process	regulation of apoptotic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24943	TTC39; tetratricopeptide repeat protein 39	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.