Gene detail

Detailed information of evm.model.contig_84209.4 in Platygyra sinensis

Genomic Location: contig_84209:46528...50957
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14559 all species →	TPR_19	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042282 all species →	Family	Inactive peptidyl-prolyl cis-trans isomerase FKBP6/shutdown	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036867 all species →	Homologous_superfamily	R3H domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46674 all species →	INACTIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0007283 all species →	Biological Process	spermatogenesis	Interproscan
GO:0034587 all species →	Biological Process	piRNA processing	Interproscan
GO:0051879 all species →	Molecular Function	Hsp90 protein binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_84209.4.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.