Gene detail

Detailed information of evm.model.contig_86430.2 in Platygyra sinensis

Genomic Location: contig_86430:14470...16347
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16474 all species →	KIND	Kinase non-catalytic C-lobe domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011019 all species →	Domain	KIND domain	Interproscan
IPR029901 all species →	Family	Protein Spire	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21345 all species →	SPIRE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030041 all species →	Biological Process	actin filament polymerization	Interproscan
GO:0030659 all species →	Cellular Component	cytoplasmic vesicle membrane	Interproscan
GO:0036089 all species →	Biological Process	cleavage furrow formation	Interproscan
GO:0040038 all species →	Biological Process	polar body extrusion after meiotic divisions	Interproscan
GO:0045010 all species →	Biological Process	actin nucleation	Interproscan
GO:0046907 all species →	Biological Process	intracellular transport	Interproscan
GO:0048193 all species →	Biological Process	Golgi vesicle transport	Interproscan
GO:0051295 all species →	Biological Process	establishment of meiotic spindle localization	Interproscan
GO:0051639 all species →	Biological Process	actin filament network formation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02098	SPIR; spire	-	Dorso-ventral axis formation	ko04320	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.