Gene detail

Detailed information of evm.model.contig_88120.1 in Platygyra sinensis

Genomic Location: contig_88120:7890...14699
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13242 all species →	Hydrolase_like	HAD-hyrolase-like	Domain	Interproscan
PF13344 all species →	Hydrolase_6	Haloacid dehalogenase-like hydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006355 all species →	Family	HAD hydrolase, LHPP/HDHD2	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR006357 all species →	Family	HAD-superfamily hydrolase, subfamily IIA	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19288 all species →	4-NITROPHENYLPHOSPHATASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0016791 all species →	Molecular Function	phosphatase activity	Interproscan
GO:0004427 all species →	Molecular Function	inorganic diphosphate phosphatase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11725	LHPP; phospholysine phosphohistidine inorganic pyrophosphate phosphatase	EC:3.6.1.1 EC:3.1.3.-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.