Detailed information of evm.model.contig_88349.1 in Platygyra sinensis

Genomic Location: contig_88349:10396...12153
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13676
all species →		TIR_2TIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000157
all species →		DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR035897
all species →		Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR017281
all species →		FamilyMyeloid differentiation primary response protein MyD88Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15079
all species →		MYD88Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007165
all species →		Biological Processsignal transductionInterproscan
GO:0002755
all species →		Biological ProcessMyD88-dependent toll-like receptor signaling pathwayInterproscan
GO:0043123
all species →		Biological Processpositive regulation of canonical NF-kappaB signal transductionInterproscan
GO:0070976
all species →		Molecular FunctionTIR domain bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_88349.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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