Detailed information of evm.model.contig_89144.6 in Platygyra sinensis

Genomic Location: contig_89144:32775...33119
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01974
all species →		tRNA_int_endotRNA intron endonuclease, catalytic C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006677
all species →		DomaintRNA intron endonuclease, catalytic domain-likeInterproscan
IPR006676
all species →		FamilytRNA-splicing endonucleaseInterproscan
IPR011856
all species →		Homologous_superfamilytRNA endonuclease-like domain superfamilyInterproscan
IPR036167
all species →		Homologous_superfamilytRNA intron endonuclease, catalytic domain-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13070
all species →		TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000213
all species →		Molecular FunctiontRNA-intron endonuclease activityInterproscan
GO:0006388
all species →		Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0000379
all species →		Biological ProcesstRNA-type intron splice site recognition and cleavageInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_89144.6.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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