Detailed information of evm.model.contig_90295.10 in Platygyra sinensis

Genomic Location: contig_90295:74336...83628
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF07647
all species →		SAM_2SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR052085
all species →		FamilyWD repeat, SAM and U-box domain-containingInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46573
all species →		WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.contig_90295.10.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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