Gene detail

Detailed information of evm.model.contig_91421.3 in Platygyra sinensis

Genomic Location: contig_91421:8067...14517
NR annotation: no NCBI-NR hit recorded
Species Platygyra sinensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16754 all species →	Pesticin	Bacterial toxin homologue of phage lysozyme, C-term	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR031922 all species →	Domain	Pesticin, C-terminal	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR023347 all species →	Homologous_superfamily	Lysozyme domain superfamily	Interproscan
IPR050525 all species →	Family	Extracellular Matrix Assembly and Organization	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR023346 all species →	Homologous_superfamily	Lysozyme-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020 all species →	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003796 all species →	Molecular Function	lysozyme activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.contig_91421.3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.