Genomic Location: contig_91597:2593...7528
NR annotation: no NCBI-NR hit recorded
Species abbreviation PSINE2 · all data for this species · gene families
| CDS |
| evm.model.contig_91597.1 |
| Transcript |
| evm.model.contig_91597.1 |
| Protein |
| evm.model.contig_91597.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12872 all species → | OST-HTH | OST-HTH/LOTUS domain | Domain | Interproscan |
| PF11608 all species → | MARF1_RRM1 | MARF1, RNA recognition motif 1 | Domain | Interproscan |
| PF01936 all species → | NYN | NYN domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041966 all species → | Homologous_superfamily | LOTUS-like domain | Interproscan |
| IPR035979 all species → | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR012677 all species → | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR025605 all species → | Domain | OST-HTH/LOTUS domain | Interproscan |
| IPR034189 all species → | Domain | MARF1, RNA recognition motif 1 | Interproscan |
| IPR024768 all species → | Family | Meiosis regulator and mRNA stability factor 1 | Interproscan |
| IPR021139 all species → | Domain | NYN domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14379 all species → | LIMKAIN B LKAP | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005777 all species → | Cellular Component | peroxisome | Interproscan |
| GO:0010468 all species → | Biological Process | regulation of gene expression | Interproscan |
| GO:1905762 all species → | Molecular Function | CCR4-NOT complex binding | Interproscan |
| GO:0004540 all species → | Molecular Function | RNA nuclease activity | Interproscan |
evm.model.contig_91597.1.
