Gene detail

Detailed information of evm.model.ptg000002l.141 in Aurelia coerulea

Genomic Location: chr9:21657257...21713953
NR annotation: XP_047124593.1, mediator of RNA polymerase II transcription subunit 24 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000002l.141

ATGGCGGCCAGTTTGATAAATACACTACTGCAGAAAGCTTGGCGGGAACAATGGTCGGTCGAGAATTGGGCCACAGAAATTGGCAGAGAATTAGCTTGCCTCTCTGGAAAGAGCCGCAAAGATTTCCTGTCAGTTTTGACCGACTCCATCATTGAGTATTCACTTTCTGGTATAAAGTCTGATTGTACATATAAGAGATATCTGAAAGATGGCCTTACAATAGAGCAATTAAACTCAAGTGATATTTTAGAATGTATTTGCAAGATGGACAAGAGTCAGAATTTGAAACAGTGCCAAAATATTCTAGAAATTGTTGAAGATGCCTTGATGCATCTGAGGAAAACCAAAGATGAAAATGAGAGCTTGAACCTGGTTGTCTGCCTGGCAAAAACTCTTTGCTGGTTACTTGGAACAATTGCTTCTTTACTGAAAAATTCATTTTTGATGGCAAAGAAAGATCTACAAAATCCTGATGTCCAACTCAGCTTGAACATTTGTGACAAATGCTTTGACCTTGTGAGACAAATCATGGATAATGCTGCTCTTCAGGGTCTTGCCCTTATTGGAAAAATTGAAATACAAGCTGAACAAGAGGTCATTTTGCAATCAAAATTAAATGAAATTGTGTCTTTGCAATTCGATTCAATACCTGATCAAAACATTGCACAACAGTTTCAGAACAATTTAAAAGGATTGATGAATGATGCTACAAGGTTCCTGAACTCGACATTCCATGGTGTAATGCTACAGAATAGAAAGCCTGGACATGTTCCTAGTTATACGCTGCAAACACTTGTTGAAATTCAGGTCATTGAAAATTTGTACATGGACAGCTCAACGATGTCAGATCTGCTTGATTCCGTTATGAGGTCTGAGAATATACCAATGGATCAGTTTTATGTTGATTTGATGAGATGCGGTTGCCATGGTATCCTCAATGCTGCAAGTGGACAAGAAGAACTCCTTTGGGCATCTTTCGTTTTCTTCAAGATCCCATCCATCGTTAGCTGCTTGAGGCTTAAATACAAACAAAGTGGATTGGACAGCTCCGTCTTTTTCACAGCTTGTAGACAATTTGCAGGCATGAATATCCTGCTCGATGATCTTGATGTTTACTGCAGATTCCAGTGTCTGCCCAGCTTCTTGACACAATGCCAGCAAAAGGGTTTATTAGATGGAGGCAAATTAGATCAGATCATGAGTCACAGAAGTCAGATCACTGCATTATTTGATGCTACAACCCCCTCTGATAGAAATCCTGTTGGAAGTGTTCTTAACGCAGCTCACCTTGTCACAGACATTTTAAAGGTACTGTCGCTTCCATGGGAAGAAAACAAAGATGTCATAAGACAGCAGTTGACTCAATTAAGTAATTCAAATGATCTCTGCAAAACATTGGCCACCGCCGCTGGAATGGATCAGTTGGGAGCATTTCTTGATCAACTAACAAGCCTAAATGAGAACACAAAGGGTCCCGTCAGTGAGCCAAATGAAGATCCCACATTTGCAGAAGTTAGAGCTGATATCTTCAACTTCAGTTTTCTTCTACTTTCCTATATTACAGCATTGTTTGGAACAAAGGTTCTCTCAAAAATCAGCAGAAAGGATTCCTTCTTTGTCACGTGGAGGATGAACTGTTCCCAAGACGTGGGACAAAAGCGTTACTCTCCAATGGCATTGGACATGATCTTAGAACAAGTTATGGCCATCAGTGCGCCGAATATTAATGCCGTACTAGCAAAATGGGATGATTACTGTTTGTGCTCTGGGGCTGTAATTAAAGAGTTAACTCAAGCATTGGCCAGTGGTGTCATTCTTGTTGACAAGATTCAGAAAGTTTGTGAGACATTCAAGAACAAGAGACCTGCTTTATCGATTTGTGCAAGTTCCTGGCTATGTACACAATACACCAGTATGATTGCTAGCAAACGCGATATGACGCTCAAAATTCTGCGAGCATTTCGAGGACGTGGTGGTCAAAAGCCAGCTCGGTCTGAATATATGGCAGTCATAATAGAAGATTTAGCAGGATCAATTGGCTTTGAGCAGCAAGCTGTCGCAAAAGGAAAAACAACTGGAAAAACAGAAGGTAATCAACGCTCTGCAGCAGATGCCCCTACTATGAATCAGATATTGCAAAAGATGATTCGGTTCCCAGGAAGTCCTTGTGTCGACAAAAAGTCATTAAATGAACTCCGGAAACATTTAGATGTTCTTTCACCAAGTGGATTTTGTAAAGAGCTTGTCAAGGCGATTCTGGACTCTGGCAAAATCGATGAAGCGAAGGCTTTTGAAATCCTCAGTTCAACATTGATATTACTAGACCCTTGTAAACTTGTTCCAGCGTTACTTGGGGATACAATGCCGTCAATCCTAAAGAGAAGCGATGCGTACAAATTATTAGCAGATCCACAGGGCAGCACTTTAGCCAGATTCCTAAGCAAATCTGTCGCATTTGCTTTGATACTATCAAAAGCCAAAGAATCTAACGAGTTACAAAGGCCTGCAAAAATCGCTAAACTTGACATTACTATTGACCTAGAAATGAAGACCGGAGATCTTGCTATCAAAAATCTAGTTTCTCTGATCGAAGACTTGCTGAGTGCAATTCGTTGGGAACAGATTGGTTCAGTGTCGATATTTTTAAGATCACTTCTGGAGCAACTTTGTATTGTGACGATGCATCTTACGCCAACTTTAAAGCTTCCTAAAGATTTGGGCTTCAAGATTCTCAAAACACTTCCTGAACAACCGCCAAAGGAGATTTTAATGTTACTTTGCAACACAGAAGATTTGGATGGACGTAAACAACTTGCTCATTCGCTTTGCAAAAGTATTGATATTAATGTGAATGGATAG

Transcript

evm.model.ptg000002l.141

Protein

Uniprot

Uniprot term	Description
Q6PI53	Mediator of RNA polymerase II transcription subunit 24 OS=Xenopus laevis OX=8355 GN=med24 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11277	Med24_N	Mediator complex subunit 24 N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021429	Family	Mediator complex, subunit Med24,	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12898	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15167	MED24; mediator of RNA polymerase II transcription subunit 24	-	Transcription machinery	ko03021	deepkoala