Detailed information of evm.model.ptg000002l.166 in Aurelia coerulea

Genomic Location: chr9:21087199...21125339
NR annotation: XP_047127927.1, structural maintenance of chromosomes protein 3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O97594Structural maintenance of chromosomes protein 3 OS=Bos taurus OX=9913 GN=SMC3 PE=1 SV=1
O93309Structural maintenance of chromosomes protein 3 OS=Xenopus laevis OX=8355 GN=smc3 PE=1 SV=2
Q9CW03Structural maintenance of chromosomes protein 3 OS=Mus musculus OX=10090 GN=Smc3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06470SMC_hingeSMC proteins Flexible Hinge DomainDomainInterproscan
PF02463SMC_NRecF/RecN/SMC N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010935DomainSMCs flexible hingeInterproscan
IPR003395DomainRecF/RecN/SMC, N-terminalInterproscan
IPR036277Homologous_superfamilySMCs flexible hinge superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041741DomainStructural maintenance of chromosomes 3, ABC domain, eukaryoticInterproscan
IPR024704FamilyStructural maintenance of chromosomes proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43977STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0051276Biological Processchromosome organizationInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0007064Biological Processmitotic sister chromatid cohesionInterproscan
GO:0034990Cellular Componentmitotic cohesin complexInterproscan
GO:0061775Molecular Functioncohesin loader activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06669SMC3, CSPG6; structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)-Proteoglycansko00535deepkoala

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