Detailed information of evm.model.ptg000002l.171 in Aurelia coerulea

Genomic Location: chr9:20850008...20933324
NR annotation: XP_047128948.1, huntingtin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P42859Huntingtin OS=Mus musculus OX=10090 GN=Htt PE=1 SV=2
P42858Huntingtin OS=Homo sapiens OX=9606 GN=HTT PE=1 SV=2
P51111Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20926Htt_N-HEAT_1Huntingtin, N-terminal HEAT 1RepeatInterproscan
PF12372Htt_N-HEATHuntingtin, N-terminal HEATRepeatInterproscan
PF20927Htt_C-HEATHuntingtin, C-terminal HEATRepeatInterproscan
PF20925Htt_bridgeHuntingtin, bridgeRepeatInterproscan
PF09756DDRGKDDRGK domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000091FamilyHuntingtinInterproscan
IPR019153FamilyDDRGK domain containing proteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR048411RepeatHuntingtin, N-terminal, HEAT repeats 1Interproscan
IPR024613RepeatHuntingtin, N-terminal, HEAT repeats 2Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR021133RepeatHEAT, type 2Interproscan
IPR048413RepeatHuntingtin, C-terminal HEAT repeatsInterproscan
IPR028426FamilyHuntingtin familyInterproscan
IPR048412RepeatHuntingtin, bridgeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10170HUNTINGTON DISEASE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04533HD; huntingtin-Mitochondrial biogenesisko03029deepkoala

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