Gene detail

Detailed information of evm.model.ptg000003l.1009 in Aurelia coerulea

Genomic Location: chr1:25296052...25312261
NR annotation: XP_038063097.1, RING-box protein 1 [Patiria miniata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P62877	E3 ubiquitin-protein ligase RBX1 OS=Homo sapiens OX=9606 GN=RBX1 PE=1 SV=1
P62878	E3 ubiquitin-protein ligase RBX1 OS=Mus musculus OX=10090 GN=Rbx1 PE=1 SV=1
Q9W5E1	RING-box protein 1A OS=Drosophila melanogaster OX=7227 GN=Roc1a PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12678	zf-rbx1	RING-H2 zinc finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR024766	Domain	Zinc finger, RING-H2-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR051031	Family	RING-box E3 Ubiquitin Ligase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11210	RING BOX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0031461	Cellular Component	cullin-RING ubiquitin ligase complex	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0097602	Molecular Function	cullin family protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03868	RBX1, ROC1; E3 ubiquitin-protein ligase RBX1	EC:2.3.2.32	DNA repair and recombination proteins	ko03400	deepkoala