Detailed information of evm.model.ptg000003l.29 in Aurelia coerulea

Genomic Location: chr1:519608...555855
NR annotation: XP_047141379.1, CSC1-like protein At1g32090 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F4HYR3Hyperosmolality-gated Ca2+ permeable channel 1.4 OS=Arabidopsis thaliana OX=3702 GN=OSCA1.4 PE=3 SV=2
Q9FVQ5Hyperosmolality-gated Ca2+ permeable channel 1.8 OS=Arabidopsis thaliana OX=3702 GN=OSCA1.8 PE=1 SV=1
Q9SY14Hyperosmolality-gated Ca2+ permeable channel 1.7 OS=Arabidopsis thaliana OX=3702 GN=OSCA1.7 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13967RSN1_TMLate exocytosis, associated with Golgi transport FamilyInterproscan
PF14703PHM7_cytCytosolic domain of 10TM putative phosphate transporterDomainInterproscan
PF02714RSN1_7TMCalcium-dependent channel, 7TM region, putative phosphateFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032880DomainCSC1/OSCA1-like, N-terminal transmembrane domainInterproscan
IPR045122FamilyCalcium permeable stress-gated cation channel 1-likeInterproscan
IPR027815DomainCSC1/OSCA1-like, cytosolic domainInterproscan
IPR003864DomainCSC1/OSCA1-like, 7TM regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13018PROBABLE MEMBRANE PROTEIN DUF221-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005227Molecular Functioncalcium-activated cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K21989TMEM63, CSC1; calcium permeable stress-gated cation channel-Transportersko02000deepkoala

TOP