Detailed information of evm.model.ptg000003l.469 in Aurelia coerulea

Genomic Location: chr1:12545301...12603252
NR annotation: PFX34262.1, Neuronal PAS domain-containing protein 2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5ZQU2Neuronal PAS domain-containing protein 2 OS=Gallus gallus OX=9031 GN=NPAS2 PE=1 SV=1
O61734Protein cycle OS=Drosophila melanogaster OX=7227 GN=cyc PE=1 SV=2
P97460Neuronal PAS domain-containing protein 2 OS=Mus musculus OX=10090 GN=Npas2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilybHLH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan
PF14598PAS_11PAS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001067FamilyNuclear translocatorInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR000014DomainPAS domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR035965Homologous_superfamilyPAS domain superfamilyInterproscan
IPR050933FamilyCircadian Clock Transcription FactorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23042CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PASInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan

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