Detailed information of evm.model.ptg000003l.574 in Aurelia coerulea

Genomic Location: chr1:15490218...15546399
NR annotation: XP_020917708.1, transcriptional regulator ATRX [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P46100Transcriptional regulator ATRX OS=Homo sapiens OX=9606 GN=ATRX PE=1 SV=6
Q7YQM4Transcriptional regulator ATRX OS=Pan troglodytes OX=9598 GN=ATRX PE=2 SV=1
Q7YQM3Transcriptional regulator ATRX OS=Pongo pygmaeus OX=9600 GN=ATRX PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF17981ADD_ATRXCysteine Rich ADD domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044574FamilyATPase ARIP4-likeInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR041430DomainATRX, ADD domainInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR025766DomainADD domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45797RAD54-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10779ATRX; transcriptional regulator ATRX-Chromosome and associated proteinsko03036deepkoala

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