Detailed information of evm.model.ptg000003l.68 in Aurelia coerulea

Genomic Location: chr1:1528988...1658376
NR annotation: CAH3112553.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
Q9VR91Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF00173Cyt-b5Cytochrome b5-like Heme/Steroid binding domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR010606DomainMib-herc2Interproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR036400Homologous_superfamilyCytochrome b5-like heme/steroid binding domain superfamilyInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR001199DomainCytochrome b5-like heme/steroid binding domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10595HERC2; E3 ubiquitin-protein ligase HERC2EC:2.3.2.26
DNA repair and recombination proteinsko03400deepkoala

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