Detailed information of evm.model.ptg000003l.695 in Aurelia coerulea

Genomic Location: chr1:18281746...18326531
NR annotation: XP_047142461.1, protein Jade-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6IE82Protein Jade-3 OS=Mus musculus OX=10090 GN=Jade3 PE=1 SV=1
Q6GQJ2Protein Jade-1 OS=Xenopus laevis OX=8355 GN=jade1 PE=2 SV=1
Q7ZVP1Protein Jade-3 OS=Danio rerio OX=7955 GN=jade3 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan
PF13831PHD_2PHD-fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR050701FamilyHistone Modification RegulatorInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13793PHD FINGER PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22156JADE3; protein Jade-3-Chromosome and associated proteinsko03036deepkoala

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