Gene detail

Detailed information of evm.model.ptg000003l.71 in Aurelia coerulea

Genomic Location: chr1:1729577...1769699
NR annotation: RMX55807.1, hypothetical protein pdam_00009550 [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6NYV5	Histone deacetylase complex subunit SAP30L OS=Danio rerio OX=7955 GN=sap30l PE=1 SV=1
Q9HAJ7	Histone deacetylase complex subunit SAP30L OS=Homo sapiens OX=9606 GN=SAP30L PE=1 SV=1
Q5SQF8	Histone deacetylase complex subunit SAP30L OS=Mus musculus OX=10090 GN=Sap30l PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	THAP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13866	zf-SAP30	SAP30 zinc-finger	Domain	Interproscan
PF13867	SAP30_Sin3_bdg	Sin3 binding region of histone deacetylase complex subunit SAP30	Family	Interproscan
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025717	Domain	Histone deacetylase complex subunit SAP30 zinc-finger	Interproscan
IPR038291	Homologous_superfamily	SAP30, C-terminal domain superfamily	Interproscan
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR025718	Domain	Histone deacetylase complex subunit SAP30, Sin3 binding domain	Interproscan
IPR038441	Homologous_superfamily	THAP-type zinc finger superfamily	Interproscan
IPR024145	Family	Histone deacetylase complex subunit SAP30/SAP30-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13286	SAP30	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000118	Cellular Component	histone deacetylase complex	Interproscan
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23308	NUFIP1; nuclear fragile X mental retardation-interacting protein 1	-	Ribosome biogenesis	ko03009	deepkoala