Detailed information of evm.model.ptg000003l.841 in Aurelia coerulea

Genomic Location: chr1:22480118...22535553
NR annotation: KXJ25392.1, Coadhesin [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
Q8AV57Protein sidekick-2 OS=Gallus gallus OX=9031 GN=SDK2 PE=1 SV=2
O88488Phosphatidylinositol phosphatase PTPRQ OS=Rattus norvegicus OX=10116 GN=Ptprq PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP