Genomic Location: chr20:4914395...4950311
NR annotation: CAH3152399.1, unnamed protein product [Porites evermanni]
| CDS | ||||
| evm.model.ptg000004l.230 | ||||
| Transcript |
| evm.model.ptg000004l.230 |
| Protein |
| evm.model.ptg000004l.230 |
| Uniprot term | Description |
|---|---|
| Q1RMU5 | RNA-binding protein 5 OS=Bos taurus OX=9913 GN=RBM5 PE=2 SV=1 |
| B2GV05 | RNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Rbm5 PE=1 SV=1 |
| P52756 | RNA-binding protein 5 OS=Homo sapiens OX=9606 GN=RBM5 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17780 | OCRE | OCRE domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR041591 | Domain | OCRE domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13948 | RNA-BINDING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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