Gene detail

Detailed information of evm.model.ptg000004l.500 in Aurelia coerulea

Genomic Location: chr20:11658160...11660286
NR annotation: XP_044166387.1, uncharacterized protein LOC122950397 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000004l.500

ATGTCTACTGCAGATGAAACCGAGGCTGCCACAGGTGAACCAACAGTGAATATAGGTGCTGAGATGCCAGGAATCAACCAACCTGGGTCAATTTTCGGGCTAAAGACACCAGAGATGCAATTAGAAGAGACAACAAAACTCCAAAATGTAGCAAAACAAACTTTGAGCATTTTTCAAGCGAACATTGATGGAACCATTCAGAGAAGAAGAGCAATCGAAATGCAAAGAACAAAAAGGCGAATAGAAGAACAATTAGAGAATGTAAAGCAGCTGAACAAGCAAATGACATACTACATGGTACAAGCAGGTGTCTCATGCGAAGAAGTAGCCAACTTCACATATCAGAGCGATGTTAGCCTCGACATTTACGAAGATATGGTTTTAAAGCTAGGAGAGGAGTTGCAGTCAATAGAAAGTAGCAAGGACGAGCAATCAATTAGTGAGCCATCAACAAATGAGAGAGCTAAAGTACCAAAGCTGGAGCTGACAACTTATGGAGGAGAAACATTAAAGTGGTTTGAATTCTGGGAGCAATTCAACAGCGTTATACACAAGAGCAATTTGGCGACAACCATGAAATTTCACTATTTACGCAAGGTATTGGTTGGACGAGCAGCAGCTGTTATCAAGGGACTTCCTACAACAGAGGAGAATTACATGGTGGCAATCGATATGCTACAGAAGGAGTTCGGAGATGACTCTAAGCTGCGAAGTGCGCATGTCAAAGCTATTCGTGACATATCGTCAGTGCCAAACGCCCATAATCTGTTCAAGCTGAGGAGATTCTACGAAGAAATTTCAGCGAATTATGCATCACTAGAATCAATGAACTATGAAGAGCAAGTTATGTGTCTTGTTGAGGAAACTGTAATGAAACTACCACGCAGTATACGCTATGAAATCACGAAAGATGACCGACAATGGACACAATGGAAATTGCCACAATTCCTGGACATGTTATGGAACTATCTCAAAGCATGTGAAGAAATTGAACCCATGGAGTCACCAAAGAGTATGACAGAATCACACAAGAGGTCAGTAGCACACACAACAACGAATAGAGCAGTGGAATGTGTTTACTGCAAAAGCACAAATCACAAGTCATTTGAATGTACAAGTGTCATCAGCGTTGCAGAAAGAAAGGCTATCTTGCAAGGTCAAAAAAGATGCTTCAACTGCACAAGAGCAAATCATACGTTGAGACAATGCAAAAGCAGAAATCTGTGTTACCACTGCAAGGGAAAGCATCATTCATCTATATGTGGAACATCAACAACAACATCAGCAGACTCAAGAAGCACTACAACAGATGGAGTTCAACACATACGAAATGGACCAGTCGCCTATCAGACTGTTCAAGCGAAAGTTGGAGGTGAACTTTGCAGACTTTTGTTGGATAGTGGAAGTGGAAAGTCATACATTAGCCGAGAACACAGCCGGAAATTGAAATTAAAGCCCATTCGAAAAGAGAACAGAATCATTGGTACTGTAAATGGAGAGATGGAAGTCAATTGTCCAATCTACAATCTAGAAGTCAATGGTGTTGGAAATGCAAATGGCAAATTTACTACAGAATTCGCAGAATTGGATCTTTTTATGCTGAGTTCAGTTCCAAACATTCATCCTGAAATCCAGCGAAAGAAGTACACGCATCTCAAGGGAATATGGTTTTCAGATGTCTCAGGAGCTGATGAATTGCCGATACATGCGATCCTGGGAGTCAAGGACTATGCACACATTAGAACAGGACGCATCGTCAAAGGAAACAAGCATGAGCCAATAGCAGAGGAAACAACACTAGGATGGACGTTGATGGGTGCAATTCAGGACCATCAACAAGCCAGAACCAGAAGCAAGGTCAATGTGATGGTAGAGAAACCAACTTCAATTGAAGAAGACTTTAAACTGCTATACGATCTGGACATCCTTGGAATCAAAGACAACAGTGAAGATGTGTATGGAGAATTCAAGGACAATATAACTAGAATGAATAATGGTCGCTATTCAGTGAAGTGTGAAGTTACCATGGAGGAAAGGTCAGTATTATCTACCAAACAACAAGCAATTGTGCGAGACAAGATTGAAGAGTTTGTTGAAGAAGTTAAGAGAGGATCAACAAACATTTGA

Transcript

evm.model.ptg000004l.500

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13650	Asp_protease_2	Aspartyl protease	Domain	Interproscan
PF03564	DUF1759	Protein of unknown function (DUF1759)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR005312	Family	Protein of unknown function DUF1759	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955	RETROTRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan