Detailed information of evm.model.ptg000004l.748 in Aurelia coerulea

Genomic Location: chr20:18458375...18519256
NR annotation: XP_047146446.1, E3 ubiquitin-protein ligase RNF123 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XPI4E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens OX=9606 GN=RNF123 PE=1 SV=1
A0A5F9C6I2E3 ubiquitin-protein ligase RNF123 OS=Oryctolagus cuniculus OX=9986 GN=RNF123 PE=1 SV=2
D3ZXK7E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF08313SCA7SCA7, zinc-binding domainDomainInterproscan
PF03188Cytochrom_B561Eukaryotic cytochrome b561FamilyInterproscan
PF00622SPRYSPRY domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013243DomainSCA7 domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR006593DomainCytochrome b561/ferric reductase transmembraneInterproscan
IPR045129FamilyE3 ubiquitin-protein ligase RNF123/RSPRY1-likeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13363RING FINGER AND SRY DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051603Biological Processproteolysis involved in protein catabolic processInterproscan

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