Detailed information of evm.model.ptg000006l.39 in Aurelia coerulea

Genomic Location: chr3:441457...461393
NR annotation: XP_046845049.1, A disintegrin and metalloproteinase with thrombospondin motifs 3-like isoform X2 [Xenia sp. Carnegie-2017]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P59510A disintegrin and metalloproteinase with thrombospondin motifs 20 OS=Homo sapiens OX=9606 GN=ADAMTS20 PE=1 SV=2
Q19791A disintegrin and metalloproteinase with thrombospondin motifs gon-1 OS=Caenorhabditis elegans OX=6239 GN=gon-1 PE=1 SV=3
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17771ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF01847VHLVHL beta domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF01421ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR041645DomainADAMTS, cysteine-rich domain 2Interproscan
IPR024053Domainvon Hippel-Lindau disease tumour suppressor, beta domainInterproscan
IPR037140Homologous_superfamilyvon Hippel-Lindau disease tumour suppressor, beta domain superfamilyInterproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036208Homologous_superfamilyVHL superfamilyInterproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR001590DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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