Genomic Location: chr13:20363738...20392787
NR annotation: XP_047128372.1, WD repeat-containing protein 3 [Hydra vulgaris]
| CDS | |||||
| evm.model.ptg000009l.172 | |||||
| Transcript |
| evm.model.ptg000009l.172 |
| Protein |
| evm.model.ptg000009l.172 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q9UNX4 | WD repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=WDR3 PE=1 SV=1 | ||||
| Q8BHB4 | WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Wdr3 PE=1 SV=1 | ||||
| Q54S79 | WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr3 PE=3 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04003 | Utp12 | Dip2/Utp12 Family | Family | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR007148 | Domain | Small-subunit processome, Utp12 | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR011047 | Homologous_superfamily | Quinoprotein alcohol dehydrogenase-like superfamily | Interproscan |
| IPR051570 | Family | TBC1 domain family involved in cilium biogenesis | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19853 | WD REPEAT CONTAINING PROTEIN 3 WDR3 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0030490 | Biological Process | maturation of SSU-rRNA | Interproscan |
| GO:0030515 | Molecular Function | snoRNA binding | Interproscan |
| GO:0032040 | Cellular Component | small-subunit processome | Interproscan |
| GO:0034388 | Cellular Component | Pwp2p-containing subcomplex of 90S preribosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14556 | DIP2, UTP12, WDR3; U3 small nucleolar RNA-associated protein 12 | - | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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