Detailed information of evm.model.ptg000009l.218 in Aurelia coerulea

Genomic Location: chr13:19375668...19438643
NR annotation: XP_027040321.1, E3 ubiquitin-protein ligase listerin-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E1C231E3 ubiquitin-protein ligase listerin OS=Gallus gallus OX=9031 GN=LTN1 PE=3 SV=1
Q6A009E3 ubiquitin-protein ligase listerin OS=Mus musculus OX=10090 GN=Ltn1 PE=1 SV=3
O94822E3 ubiquitin-protein ligase listerin OS=Homo sapiens OX=9606 GN=LTN1 PE=1 SV=6

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04908SH3BGRSH3-binding, glutamic acid-rich proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006993FamilySH3-binding, glutamic acid-rich proteinInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR039795FamilyE3 ubiquitin-protein ligase listerinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12389ZINC FINGER PROTEIN 294Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0043023Molecular Functionribosomal large subunit bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0072344Biological Processrescue of stalled ribosomeInterproscan
GO:1990112Cellular ComponentRQC complexInterproscan
GO:1990116Biological Processribosome-associated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22377LTN1; E3 ubiquitin-protein ligase listerinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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