Detailed information of evm.model.ptg000009l.247 in Aurelia coerulea

Genomic Location: chr13:18711489...18712796
NR annotation: XP_022783919.1, transcriptional adapter 2-alpha-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3SZP8Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1
O75478Transcriptional adapter 2-alpha OS=Homo sapiens OX=9606 GN=TADA2A PE=1 SV=3
Q8CHV6Transcriptional adapter 2-alpha OS=Mus musculus OX=10090 GN=Tada2a PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR016827FamilyTranscriptional adaptor 2Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR017884DomainSANT domainInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12374TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0070461Cellular ComponentSAGA-type complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15127TADA2B; transcriptional adapter 2-beta-Chromosome and associated proteinsko03036deepkoala

TOP