Detailed information of evm.model.ptg000009l.288 in Aurelia coerulea

Genomic Location: chr13:18335489...18357006
NR annotation: XP_002169496.4, PAX3- and PAX7-binding protein 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P58501PAX3- and PAX7-binding protein 1 OS=Mus musculus OX=10090 GN=Paxbp1 PE=1 SV=3
Q9Y5B6PAX3- and PAX7-binding protein 1 OS=Homo sapiens OX=9606 GN=PAXBP1 PE=1 SV=2
Q8BKT3Intron Large complex component GCFC2 OS=Mus musculus OX=10090 GN=Gcfc2 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyGCFC

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07842GCFCGC-rich sequence DNA-binding factor-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022783DomainGCF, C-terminalInterproscan
IPR012890FamilyIntron Large complex component GCFC2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12214GC-RICH SEQUENCE DNA-BINDING FACTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13211GCFC; GC-rich sequence DNA-binding factor-Spliceosomeko03041deepkoala

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