Detailed information of evm.model.ptg000009l.366 in Aurelia coerulea

Genomic Location: chr13:16551733...16589306
NR annotation: XP_047128533.1, cell division cycle 5-related protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A7SD85Cell division cycle 5-related protein OS=Nematostella vectensis OX=45351 GN=cdc5l PE=3 SV=1
Q99459Cell division cycle 5-like protein OS=Homo sapiens OX=9606 GN=CDC5L PE=1 SV=2
O08837Cell division cycle 5-like protein OS=Rattus norvegicus OX=10116 GN=Cdc5l PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11831Myb_Cefpre-mRNA splicing factor componentFamilyInterproscan
PF13921Myb_DNA-bind_6Myb-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047240DomainPre-mRNA splicing factor component CDC5L/Cef1, second SANT/myb-like domainInterproscan
IPR017930DomainMyb domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR021786DomainPre-mRNA splicing factor component Cdc5p/Cef1, C-terminalInterproscan
IPR047242FamilyPre-mRNA splicing factor component CDC5L/Cef1Interproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45885CELL DIVISION CYCLE 5-LIKE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0000974Cellular ComponentPrp19 complexInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12860CDC5L, CDC5, CEF1; pre-mRNA-splicing factor CDC5/CEF1-DNA repair and recombination proteinsko03400deepkoala

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