Genomic Location: chr13:15915079...15957198
NR annotation: XP_001624661.3, serine/arginine repetitive matrix protein 1 isoform X2 [Nematostella vectensis]
| CDS | |||||
| evm.model.ptg000009l.384 | |||||
| Transcript |
| evm.model.ptg000009l.384 |
| Protein |
| evm.model.ptg000009l.384 |
| Uniprot term | Description |
|---|---|
| Q5ZMJ9 | Serine/arginine repetitive matrix protein 1 OS=Gallus gallus OX=9031 GN=SRRM1 PE=2 SV=1 |
| Q8IYB3 | Serine/arginine repetitive matrix protein 1 OS=Homo sapiens OX=9606 GN=SRRM1 PE=1 SV=2 |
| Q5R5Q2 | Serine/arginine repetitive matrix protein 1 OS=Pongo abelii OX=9601 GN=SRRM1 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01480 | PWI | PWI domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002483 | Domain | PWI domain | Interproscan |
| IPR052225 | Family | Serine/arginine repetitive matrix | Interproscan |
| IPR036483 | Homologous_superfamily | PWI domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23148 | SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0048024 | Biological Process | regulation of mRNA splicing, via spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K13171 | SRRM1, SRM160; serine/arginine repetitive matrix protein 1 | - | Spliceosome | ko03041 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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