Gene detail

Detailed information of evm.model.ptg000009l.393 in Aurelia coerulea

Genomic Location: chr13:15710222...15779277
NR annotation: XP_048577549.1, presequence protease, mitochondrial isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000009l.393

ATGAGATTAGGCATCAACAACCAAGAAGAAGGCCTAAAAAGCGGCTGCACAAAAAGCTGTGTAATCAACGCTGTAAAATCTTGGCTACCAACACACATTGAAAAGCAGAATATGGATGACAGAGGCTACTTCAGAGGTGAATTTCAAAGACCTTCTCCATACCAAAGTCCAGATTCTATTTCCCCATTCCGATCAACATTTGTGAGTCAAAGGTCCATTGATTCTCCAATCGTAAATGGATACAACAGCTCAAGGACATCATACCAGGACTACCCCACAACTAGGAGGTTGTTGGAAGATCAACATGAATATGAAAAGAGCAAGGCAGATATAGCTGAAGCTGCACAAGAAACCAGTAGTAGAGATGTGATCACGGCTTTGAAAAGACTCCAAGAAAAATTTGCCAAACTAGAACTTGATAGGATCAAGGCAGAAGAGAACCTGAAACATTTGACAAGTGAAACAGATGAGTACAAAACAATACTGCAGAGAGATCGTGAATTATCTGAATCAGCTCAAAGTGCAATTGAAATTCAAAAACAAGAACTCGAGCAGAAGCTTATGACTGCAGAAGACAAGTGTCAGCTGCTGGAAAAACAAATAAAGTACATGAGAAGTATTCCACAACGACCAGAATTGGATTCAACAACCAGGCCATACACATATGAGCCACAACCTTACAGGTCAAGTATACAACAGCCCCAGGGTTACATGTCTCCACGTAATGAAAAACTGGCAGAGTTAGAACGAGGTCAGATTAAGCTGACTGCATCACAAACACTCGCTGAGAGCAAGATTCGAGAACTGGAAGAGAAATTACAGGAAGAACGACACCAAAGAAAATTACTTCAAGATAGAGCTGCAGAGCTTCAAACTATAGCCTCGACGAACAGAATTCTCTTGAATATGACATCTCCGGAAGAACAGAAACCGAGAAGGAAAATTAAAAAGAAGAAGACTGTCGTTAAAAAGAAACCTCCTCCAGCTGCAACTCCACCTGCGCATTATCGTCTTGATATGGGAAATATTCCATTCGTTGTTGGCCAGTCGACTTCAAAATCTCATGCTCTTGGTGCAAACATACAAAAAATATTTTCAATGATGAAAGCACACAATCCTCAACTTTGTGAGGCAGCTACGCAAGCACAAAAGAGATATCACGTGATCAGAGAGCCATCCACCACTTCGTCAAGTGACACTGAAGGAATTACAGAGCTGATTACGCAGTTACAAGATGAGTTTGGTCACATGGGATTCGAGCACAGTGAGCTTGTCAAGCAAATTCAAGAAACGTCAGATATTAAATTTCGTGAAGATCTTGAACGGGAACTGGAACGACTTGTTACCCGAATGGAAACGAAAGGCGAACAAATAGCCATTTTGAAAGAACACGAACGAAAACATTTGCAACATAAACGGCGGAAAAGTGACGCTCCGAATCGGCGGATTGTTGCATCAAAAGGCTCGGAGATCGAAGTTGTTACGACGATCAAGACGAAGGGTGATACGCCAAAAACCGAAACACGAGTGTCGAAAGCCCCGAGAAGCGAACCTCGAGTGCCGAACAGATCGAACAATTTGGATGTTTTTAAAAGGGTTCAGAAATTACAAGGGACGTTAAGGCAAGGGCAATATAAAGAAGGTGACAGTCTGCATGGATACATGGTCAAGCAGGTTGAGAGCATACCAGATTTTCACATGGTTGCAGTAAAACTAGAGCATGAAAAAACTGGTGCTGAACATCTTCATTTAGCAAGAGATGATCAGAATAATGTATTCAGTGTTACCTTCCGAACGACACCGATGGATAGCACAGGTGTGCCACATATTCTTGAACATACAACACTGTGTGGCTCAAAGAAATATCCATGTAGAGATCCATTCTTCAAAATGTTGAACAGATCCTTGTCAACATTCATGAATGCATGGACAGCCAGTGACTACACCATGTACCCTTTCTCAACACAAAATGGAACAGATTATTCCAATCTTCTCTCTGTTTATCTCGATGCTGTTTTCTTCCCTAATTTGCGTGAGCTGGATTTTCTGCAAGAAGGATGGAGACTTGAAAACGAGAAGCTTGACGACCCTAATTCACCTCTGACGTTTAAAGGTGTGGTTTTCAATGAGATGAAAGGTGCTTTTTCGAACTCCGAGAGTCTGTTTGCAACCCATTACCAGAGTCTTTTGCTACCAAGTCATACTTATGGTTATGTGAGTGGTGGTGACCCCCTGATTATACCTGAATTGACTTGGGAACAATTGAAAGAATTTCATCGAACTCATTACCATCCTACAAATTCAAAATTTTACACATATGGCGACCTTCCTCTCGATAAGCATCTAGAGTTGATCAACAAACAGGCTTTGGTTTCATTCGATAAATTGGCGACTGATACCAAGATTCCTAATGAACCCAAATGGACGCAACAAAGGCGAAATGAGGTTTTCTGTCCACCTGACAACCTTGCTGCAGATGTAAATAAACAGACTACGATATCCGTTGGGTATTTACTTGAAAGCTCAACTGACCCATTCAAATCATTCACAATGGGAATTCTGTCATCATTATTAGTCGGTGGACCAAATTCACCTTTTTATCAAGCTCTCATTAAACCCAATATCGGATCTGGTTATTCTCCCGTCGTCGGCATTGACACCAGCACGAAAGATGCTACGTTTGGAGTTGGGTTGCAGGGAGTCAGCAAAAATGATGTACCAAAAGTTCTTGATATTATTCAAGAAACATTCGAGAAGGCTGCTCGAGATGGTTTCGAAGAGGAAAGAATCGAATCAATTCTACATCGAGTTGAGTTATCTCAAAAGCACCAGACAAGTAATTTTGGACTCGGTGTTATTTCATCTCTAATGTCATCATGGAACCATGATGCCGACCCAGTTGCTATGATGAGTGTGAATGAACAGGTCGCAAAATTCAGGGCTGCACTTAAAGATGACAAAGAATTTCTTCAAAAGAAAGTACGAGAATATTTCGTGGAAAATAAGCATCAGCTCGTTTTGGAAATGAACCCGAAGGAGGACTATCTAGAAGCAAACGAAAAAGAGGAAGAAAAGATCTTGGCTTCAAAAGTGAAGAAGTTAAGCGAAGACGACCGCAAAGCTATTTATCGTAAAGCTTTGATACTTGAAAAGCAGCAAAATGAAAGTGATGATTTGTCTTGCTTGCCAAAGATGTATGTGAAAGATATCGACAAGGATTCCAAGAAGGTTGAAGTCGATGTTGAATATTCAGAGAACAATGTTCCCGTACAAGTTTGCGTACAGCCTACGAATGGAGTGACGTATTTCAGAGCCATCTCAGATGCTTCAAGCTTACCATATACTTTAAAACCGTATCTTCCACTGTTTTGCAGTATCATAACAAAGATGGGTGCAGGAAAGAAGAATTATGAAGAGCTTGCACAAGAAATGGAAATGTATACTGGAGGATTAGGTGTCAGCACTCATCTCGTATCTCATCATACAGAAACAGATCAATTTGAACTGGGAGTGATGTTTGGATCAAATTGCCTGGATAGAAATATTCCAAGGATGTTTTCACTATGGCAAGATATTTTCAACGAGCCAAATTTGAGTGATTTAGATCGACTTCGTACACTGATAAATTCAATAGCATCTGATATGGCAATGTCAATAGCTGATTCTGGCCATGCGTATGCCGTTTCTTCCGCCGCTAGTAGTCTTACTCCTGCTGGCAGATTTGGTGAATTATTTGGTGGAATTTCTCAGGTATTGTTCATGAAAGAAATAGCCGAAAAAGAAGATTTAAAAGATGTTTCAAATAGTTTAATTCAAATAGCAATGCATATTCTCAATTCGAATGATCTCAGGTGTTCCTTGAACATGACTGCGGATTCTAGAAATTTCGCAGCAAATGCTTTGGATGAATTTATGGCTTCAATAAACACTATGGGATCTGATGAAATTGAATTTCACACGATGCCGTCATTCGTTGCAAAGAAAAAGAAAACATTTATTCCCATGCCATTTCCAGTCAATTATGTAGGCCGTTCTGTCAAAACTGTACCTTATAACCACGAAGACTGTGCAAAGTTACAGATTTTGGCAAGACTGCTTTCTTCGAAATTCCTCCACAGAGAAATTAGGGAGAAAGGAGGAGCCTATGGAGGTGGAGCAAAGCATGCTGGGAATACATTCTCATTTTATTCATACAGAGATCCAAATTCAACGAAGACATTAAAAGCCTTCGAAGATTCAATTCAATGGGCAAGGAATAGCAAGTTTGATGCAGACAGCATTGAAGAAGCAAAGCTGTCTGTTTTCTCAGCAATCGACAGCCCGATATCACCCGGGAGAAGAGGACATAATTTATTTTCACAACGAATAACCAATGAAATGCGTCAACAGTTTCGTGACAGAATATTTGAAGTATCGAAAGATGACTTGGTGAATGTTGCTGACCGATATTTGGCATCAGGTGAACAAATAGATTCAATGGCGATAATTGGACCTGAAAATGAGGAACTTTTGAAAGATGAGACATGGCAAACCAAACAAGGACTATAA

Transcript

evm.model.ptg000009l.393

Protein

Uniprot

Uniprot term	Description
Q5JRX3	Presequence protease, mitochondrial OS=Homo sapiens OX=9606 GN=PITRM1 PE=1 SV=3
Q6PF24	Presequence protease, mitochondrial OS=Xenopus laevis OX=8355 GN=pitrm1 PE=2 SV=1
Q28BR5	Presequence protease, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pitrm1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00675	Peptidase_M16	Insulinase (Peptidase family M16)	Family	Interproscan
PF06657	Cep57_MT_bd	Centrosome microtubule-binding domain of Cep57	Domain	Interproscan
PF14073	Cep57_CLD	Centrosome localisation domain of Cep57	Coiled-coil	Interproscan
PF08367	M16C_assoc	Peptidase M16C associated	Family	Interproscan
PF05193	Peptidase_M16_C	Peptidase M16 inactive domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011765	Domain	Peptidase M16, N-terminal	Interproscan
IPR011249	Homologous_superfamily	Metalloenzyme, LuxS/M16 peptidase-like	Interproscan
IPR024957	Domain	Cep57 centrosome microtubule-binding domain	Interproscan
IPR025913	Domain	Cep57 centrosome localisation domain	Interproscan
IPR013578	Domain	Peptidase M16C associated	Interproscan
IPR007863	Domain	Peptidase M16, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43016	PRESEQUENCE PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0016485	Biological Process	protein processing	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0042802	Molecular Function	identical protein binding	Interproscan
GO:0043015	Molecular Function	gamma-tubulin binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06972	PITRM1, PreP, CYM1; presequence protease	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala