Genomic Location: chr13:15172176...15397897
NR annotation: XP_047124906.1, utrophin-like isoform X2 [Hydra vulgaris]
| CDS | ||||
| evm.model.ptg000009l.402 | ||||
| Transcript |
| evm.model.ptg000009l.402 |
| Protein |
| evm.model.ptg000009l.402 |
| Uniprot term | Description |
|---|---|
| P11533 | Dystrophin OS=Gallus gallus OX=9031 GN=DMD PE=2 SV=1 |
| Q5GN48 | Dystrophin OS=Sus scrofa OX=9823 GN=DMD PE=1 SV=1 |
| P11530 | Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09068 | EF-hand_2 | EF hand | Domain | Interproscan |
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF09069 | EF-hand_3 | EF-hand | Domain | Interproscan |
| PF00397 | WW | WW domain | Domain | Interproscan |
| PF00569 | ZZ | Zinc finger, ZZ type | Domain | Interproscan |
| PF00435 | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF01477 | PLAT | PLAT/LH2 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050774 | Family | KCMF1 and Dystrophin | Interproscan |
| IPR018159 | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR000433 | Domain | Zinc finger, ZZ-type | Interproscan |
| IPR036392 | Homologous_superfamily | PLAT/LH2 domain superfamily | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR015153 | Domain | EF-hand domain, type 1 | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR001202 | Domain | WW domain | Interproscan |
| IPR001024 | Domain | PLAT/LH2 domain | Interproscan |
| IPR015154 | Domain | EF-hand domain, type 2 | Interproscan |
| IPR036020 | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR035436 | Family | Dystrophin/utrophin | Interproscan |
| IPR043145 | Homologous_superfamily | Zinc finger, ZZ-type superfamily | Interproscan |
| IPR002017 | Repeat | Spectrin repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12268 | E3 UBIQUITIN-PROTEIN LIGASE KCMF1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0099536 | Biological Process | synaptic signaling | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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