Gene detail

Detailed information of evm.model.ptg000011l.13 in Aurelia coerulea

Genomic Location: chr11:22939948...22942365
NR annotation: MCH2389802.1, hypothetical protein [Nitrospinales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000011l.13

ATGCCTGTAGGAATTAACCAGTGGCGTGCAGGAATCGCAGGACACCGTATTTGTTTAATGTCAAAAGTCCCAATGGTCCCTGAAATATCAATGGTCGAGTTTTCCTTTTGTGCACTTCAGTACTTTGCCTACATGTACTTATTCATCTGTTCATCTGTTCTTTCATTGCCGTTATCCCTCGTTGTTTCTTTCTTTTGGACCCACCTCGCTGCAACTGTTGTGTCAGCTGCTCCCCCAAAAAGTGCAGATGTCAGTCTTATCTTTGCAAAAATAAATTCACGTATGATTGTTAGTCTTTGGCTTTTGATTTCCCTTGTAATTGAGCTACCAAAATTATGTAAAACCATTCTTACTTACTGCAAGGCGTACCCAAGGAAAGCTCTGTGTTTTGTGCAGCAAATTCTTTTTGCTCTGCTTATTGGGACCGCACTGGAGATTTTTCAGGTTGGTGGGTGCAGCCCATTCAGCCAGCTGCTTTTATGTGGAGACATTCATCCAAATCCTGGCCCAGAGATTAATAAATGTTTGAAGTTCTTTCACTGGAACTTGAATAGCATCTGTGCTAGAGATCGAATAAAGATACCTCTTATTGAAACTTATGATGCCCTCTACAAATATGACATTATTGCTATTTCTGAGACTATGCTTGATCAAACTGTGAAAAATGATGAAATCTATATTGAAGGGTTTAGCAAAGAGATATATCGCAGTGATCATCCGAGCAATACCAAAATTGGTGGAGTGTGTCTTTATTTTCGCGAAGGGCTACCCATCAAGAGACGGACTGACCTTGAGCTATTACCTGAAATTATCATTACTGAAATTAGAATAGCACGTAAAAAAGTTCTCCTTGGGACAATGTATCGTAGTCCAAGTCAAAACAGCGAGCAATTCGAAACCTTTATTGATAGCTTGCAACAGACCATCAATAAAATGAAAGCTGAAAATCCACACTGCATGATTTTAACAGGTGATCTCAATTGTAGATCTTCAATGTGGTGGACTGAGGATATTGAACAGCCCGAGGGTACTGCTTTGGACGAATTTATGGAAATAAATGGTCTGTATCAACTGATTGAGGAGCCAACTAATATAAGAAATGAAGGCTGTTCTTGCATTGACTTAATTATTACTGACCAGCCAAATATGTTTGTTGACTGTGGTGTTCACCCTTCCTTGGACGAACACTGTCAGCATCAAATTATCCACGGTAAACTGAATGTCTCTTTGCCATCTCCCCCTCCATATAAAAGGACAGTATGGGATTATTCCAAGGCTGATGTTCAAATGATTATTGAATCAATTAACAAAATCGATTGGACTGCTTGCTTTGATGGGCTAAATCCTACAGAAATGGTAGAAATATTTACAAATGTTCTTGCTGAAATTTTTTCGGAGTATATACCTAATAAAGTTGTCAAATTTGATGATAAGGATCCACCGTGGATGAAGCAGGAATTAAAAACTGCTATTAAGCGCAAACACAGAACATATGCTAAATTTGTTAGACGTGGTAGAAAGCAAGAAGACTGGAACTCTGTTAAAAATGTCCAAAACATAACATCAAAAATGATTACCAATGCTAAAAATGATTATTATCTCGGACTTGGCAGAAAGTTATCGAATAACGTAACTGGGGCTAAATCATATTGGACCTTATTCAACAGACTTCTCAATAAAAAGAAAGTTTCTAACATACCCCCTCTTATTGAAAATGGCTTATTTATTACCAATGTAGAAGCAAAAGCAAATATTTTCAATGAGTTCTTTGTTGCTCAATGCAGGGAGATAGAAACTGGTAGTACTATCCCTACATTTATTCCGCAGTTTCCATCACCCTTATTCAATATAGATATAAACAGGGAAAAGGTACTTCGAATCATTCGTTCTCTAGATTCTAAAAAGGCACATGGATGTGACGGAATTTCTGTTGCCATGATCAAAATATGTGACAATTCGATAGTAGATCCTCTGTGTTGCATTTTTGAAAGATGCCTTGAAACAGGAACTTACCCTTCTCAATGGAAGAAAGCAAATATAATTCCTGTGCATAAAAAGGGCTGCAAACAGAACAAGAAAAACTATCGCCCAATTTCCCTACTTCCAATTTTTGGAAAGTTTTTTGAAAAGCTATTATTTGATGCCATCTACGAGCATCTCAGTATAAATGGTCTTATATCGCCTCATCAATCAGGGTTTCGTCCCGGTGATTCGACTATCAATCAGTTACTGCTCATCACTCAAAATATTTATAGAGCCTTCGATGAAACTCCTAGTAAAGAAACACGTGCCATCTTCCTTGACCTTTCAAAGGCATTTGACAGGGTCTGGCATGAGGGTCTCATTTACAAGTTGGAATCCAATGGCTTACATGGAAATGTTCTTCGGATTGTTAAAAGTTTTTTTGTCAGATCGTAA

Transcript

evm.model.ptg000011l.13

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan