Detailed information of evm.model.ptg000011l.238 in Aurelia coerulea

Genomic Location: chr11:14888167...14956226
NR annotation: XP_015747760.1, PREDICTED: histone H2A deubiquitinase MYSM1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5F3F2Histone H2A deubiquitinase MYSM1 OS=Gallus gallus OX=9031 GN=MYSM1 PE=2 SV=1
Q5VVJ2Deubiquitinase MYSM1 OS=Homo sapiens OX=9606 GN=MYSM1 PE=1 SV=1
B6MUN4Histone H2A deubiquitinase MYSM1 OS=Branchiostoma floridae OX=7739 GN=MYSM1 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Jab_MPN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan
PF14464Prok-JABProkaryotic homologs of the JAB domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017930DomainMyb domainInterproscan
IPR050242FamilyJAMM/MPN+ metalloenzymes, peptidase M67AInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR028090DomainJAB domain, prokaryoticInterproscan
IPR037518DomainMPN domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10410EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP