Detailed information of evm.model.ptg000011l.46 in Aurelia coerulea

Genomic Location: chr11:21687613...21733529
NR annotation: XP_047122482.1, YTH domain-containing protein 1-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96MU7YTH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=YTHDC1 PE=1 SV=3
E9Q5K9YTH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ythdc1 PE=1 SV=2
Q9QY02YTH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ythdc1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04146YTHYT521-B-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007275DomainYTH domainInterproscan
IPR045168FamilyYTH domain containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12357YTH YT521-B HOMOLOGY DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000381Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:1990247Molecular FunctionN6-methyladenosine-containing RNA reader activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20100YTHDC1; YTH domain-containing protein 1-Spliceosomeko03041deepkoala

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