Gene detail

Detailed information of evm.model.ptg000016l.468 in Aurelia coerulea

Genomic Location: chr17:11300561...11332302
NR annotation: XP_015768594.1, PREDICTED: transcriptional regulator Myc-like isoform X2 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q17103	Myc protein (Fragment) OS=Asterias rubens OX=7604 GN=MYC PE=2 SV=1
P10395	Viral myc transforming protein OS=Avian myelocytomatosis virus CMII OX=11869 GN=MYC PE=3 SV=2
P01110	Viral myc transforming protein OS=Avian myelocytomatosis virus 29 OX=11868 GN=MYC PE=3 SV=2

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002418	Family	Transcription regulator Myc	Interproscan
IPR050433	Family	Myc family transcription factors	Interproscan
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45851	MYC PROTO-ONCOGENE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0046983	Molecular Function	protein dimerization activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04377	MYC; Myc proto-oncogene protein	-	Messenger RNA biogenesis	ko03019	deepkoala