Detailed information of evm.model.ptg000016l.655 in Aurelia coerulea

Genomic Location: chr17:7260751...7307602
NR annotation: XP_031559816.1, protein saal1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DCP5Protein saal1 OS=Xenopus laevis OX=8355 GN=saal1 PE=2 SV=1
Q6NVK9Protein saal1 OS=Xenopus tropicalis OX=8364 GN=saal1 PE=2 SV=1
Q96ER3Protein SAAL1 OS=Homo sapiens OX=9606 GN=SAAL1 PE=1 SV=2
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyTHAP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02178AT_hookAT hook motifMotifInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR017956Conserved_siteAT hook, DNA-binding motifInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR050331FamilyZinc fingerInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

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