Gene detail

Detailed information of evm.model.ptg000016l.735 in Aurelia coerulea

Genomic Location: chr17:5568194...5576541
NR annotation: XP_029182415.2, protein mab-21-like 2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000016l.735

ATGGATGACGATTCTGATTGTAGTAATGAATTTAGCAACGATAGTAGTAGTGAATTCGATTTTAACGATCCGCACGAAAAAAGCAAACATAACGACATAGATTCCGAGGACAACAGTGAGGATGAATTTGATGTCAAGGATGAGGGTCAACACGAAGAGAACAGCTCTAACGAGTTCAACTTCGACGATCCACACGAAGATAGCAATAACTGTAGTGAATTCGATTTTAACGATCCACACGAAAAAAGCAAACACAACGAAATAGATTCCGAGGCCAACAGTGACAGTGATGATGAATTTGATGTCGAGGATGAGGGTCAACACGAAGAGAACAGCCATAACGAGTTCAATTTAGACGATCCACACATAGATAGCAACGATAGTAGGGAATTCGATCTCGACGATATCATTTACATCGATGCAAACGAGGACAACAGCGATGATGAATATTTCGACGGCCTATACGTATACGAAGAATACAACCATAACGATTTCAATATCGACGGCCTATTCGAAGAAAGCAACTATAACGAATTTGATTTCGACGACCTACACGAAGAAGACGAAGAAAGCAACTATAACGAATTTGATTTCGACGACCCACACGAAGAAAGTGTAGATGAATTTACGTTAGATGAACTTGAACTTCTTCGTGAAATTCTATTTGACAAAGCTGAAGCATTCCAAAAATTTGCTGCCAAGGGAAATAAATCAGCTGGCACAGCAACAAAAGCTCCTGTTGATCCAGAGCAAAGTGACAAATCTCCACCACTTCAACTCCAAGAATTATTTCGTCAGTATGTGCATCAAAAATTAGAAATCAAGAAGTCAGACTTTGAAAAGGCAAAGAAAGAAATATATCCAGTTGTGAAGTTGATTGTTGATAAAGTTGGTGGCTATGATTCCAGGTTCAGAATGTCATTGGAATACAGAGGCAGTGTTTATGAAAATGTGAAGATCAAGGAAGCAGATGAGTTTGATTTTGATTTGCCCATCAAAGAATTACGAATCAATGAGGGTAGGAAAGGAAGGCTTCATGATGTTCCCTCAGAGTTTACATTGTACAAATTAAAGCCATCACTTCAGAAGAGATGGAGAAATCTTGCAGATTCTGCTGGATTGTTATTGTCAGCTGAAAGAGTTGTTGCAAGATTTGCTAGTTTGGTCAGCCAGGCAGTGGGTGAGATCAATCAGAAGAAGGAGTCTCCTTTCAAATTAGAGATTGTCACAAATCATCCAGCAGTAACTATTCGATTCAAGAAGAAAAAGACGACGATATACAATGTTGATTTGGCGCCTGTGATCGAAGTAACAAAATGGCCAGAACAGCTAACTGAAGGATGGGAGACCCGAGCAAGAAATGGTTGGCCATCAGATGAGATTATTGAGAATCTGAAGAAAAACACACCAGTCTGCCTTGCTCCAAAATTATATCGAGATCAGAGATATGAAAAGAGGGATTATCTCTGGAGATACGCATTCAACAAAGGAGAGAAGAAGCTGCTGAAGAAAAGCAACCCTGGCCAAAGCAACTCATGCCGCAAAAATGTTCTTCGTATTTTGAAAGGCCTGATTCTCGACTTGAACTGGAATTGTCTTCGTTCATATCACATGAAAACAGTGTTGCTGCATGAAAGCGAGAGCTGGCCTAGAAATGAACAGTGGAGCGACACCTTACTCGAAGAAAGAGTCCTATCTGCTGTCAGGAGATTGAGGAGTTTTGTAAACAAACCCGAGCCGAAATGCAAACACTTCTTTCTTCCTGGCACAAATATCCTGGAAGGATTAGGCGAGAAGGAAAGACTTGATCTTGTAAAGAAGGTAGGGTTGTTTTTAAAAGATCCCGCAGCTGCGATGCAAAGGATTCTCAAAGGGGATGAGGAGGAGGAGGGTCAAGACAATGATACAGAGGCTGGCAAAAATGACAAAGATGGGTCTGCCTTGGAAAAGAAATCGGGGACTGCGGTGTCAAAGAAAAGAGATCAAGGGAAAGCTGACAAGCAAGGATCCAGGCATTCGAAGAGATCTTCGAATAGGGATTCTGGAAAGGCTAGTAAAAAGAGCTCCGAAAAGCCTGGAAGTAAAAATCGTGGCCGTGGAAATCAGCAAAAAGAACCGGGGAAAAAGAAATCAACCAGTAAGGTGGAACGCAAATACAATTGGAGTGCAAAAGCGTCCAAGACGTTGTTTGTGACAATTGATTGA

Transcript

evm.model.ptg000016l.735

Protein

Uniprot

Uniprot term	Description
A0A2B4RP11	Cyclic GMP-AMP synthase-like receptor 1 OS=Stylophora pistillata OX=50429 GN=cGLR1 PE=1 SV=1
Q8UUZ1	Protein mab-21-like 2 OS=Danio rerio OX=7955 GN=mab21l2 PE=1 SV=1
Q9Y586	Protein mab-21-like 2 OS=Homo sapiens OX=9606 GN=MAB21L2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20266	Mab-21_C	Mab-21 protein HhH/H2TH-like domain	Domain	Interproscan
PF03281	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024810	Family	MAB21L/Cyclic GMP-AMP synthase-like receptor	Interproscan
IPR046906	Domain	Mab-21-like, HhH/H2TH-like domain	Interproscan
IPR046903	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10656	CELL FATE DETERMINING PROTEIN MAB21-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14721	RPC5, POLR3E; DNA-directed RNA polymerase III subunit RPC5	-	Transcription machinery	ko03021	deepkoala