Detailed information of evm.model.ptg000016l.766 in Aurelia coerulea

Genomic Location: chr17:4927358...4941099
NR annotation: XP_022780079.1, KRR1 small subunit processome component homolog [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O74777KRR1 small subunit processome component homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mis3 PE=3 SV=1
Q8BGA5KRR1 small subunit processome component homolog OS=Mus musculus OX=10090 GN=Krr1 PE=2 SV=1
Q13601KRR1 small subunit processome component homolog OS=Homo sapiens OX=9606 GN=KRR1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21800KRR1-like_KH2KRR1 small subunit processome component, second KH domainDomainInterproscan
PF17903KH_8Krr1 KH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR048548DomainKRR1 small subunit processome component, second KH domainInterproscan
IPR024166FamilyRibosomal RNA assembly KRR1Interproscan
IPR048549DomainKRR1 small subunit processome component, second KH domain, eukaryotesInterproscan
IPR041174DomainKRR1 small subunit processome component, first KH domainInterproscan
IPR048550DomainKRR1 small subunit processome component, first KH domain, eukaryotesInterproscan
IPR004087DomainK Homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12581HIV-1 REV BINDING PROTEIN 2, 3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06961KRR1; ribosomal RNA assembly protein-Ribosome biogenesisko03009deepkoala

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