Detailed information of evm.model.ptg000017l.227 in Aurelia coerulea

Genomic Location: chr15:15066554...15077275
NR annotation: CAB4028522.1, calcium-responsive transcription factor isoform X2 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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