Detailed information of evm.model.ptg000017l.29 in Aurelia coerulea

Genomic Location: chr15:16703968...16766232
NR annotation: XP_047123501.1, cytoplasmic polyadenylation element-binding protein 1-B-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R733Cytoplasmic polyadenylation element-binding protein 1 OS=Pongo abelii OX=9601 GN=CPEB1 PE=2 SV=1
P70166Cytoplasmic polyadenylation element-binding protein 1 OS=Mus musculus OX=10090 GN=Cpeb1 PE=1 SV=1
P0C279Cytoplasmic polyadenylation element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Cpeb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16366CEBP_ZZCytoplasmic polyadenylation element-binding protein ZZ domainDomainInterproscan
PF16367RRM_7RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032296DomainCytoplasmic polyadenylation element-binding protein, ZZ domainInterproscan
IPR038446Homologous_superfamilyCEBP, ZZ domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034977DomainCPEB-1, RNA recognition motif 1Interproscan
IPR034819FamilyCytoplasmic polyadenylation element-binding proteinInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12566CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEBInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000900Molecular FunctionmRNA regulatory element binding translation repressor activityInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006417Biological Processregulation of translationInterproscan
GO:0008135Molecular Functiontranslation factor activity, RNA bindingInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0043022Molecular Functionribosome bindingInterproscan
GO:0045182Molecular Functiontranslation regulator activityInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:1990124Cellular Componentobsolete messenger ribonucleoprotein complexInterproscan
GO:2000766Biological Processnegative regulation of cytoplasmic translationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02602CPEB, ORB; cytoplasmic polyadenylation element-binding protein-Messenger RNA biogenesisko03019deepkoala

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