Gene detail

Detailed information of evm.model.ptg000024l.235 in Aurelia coerulea

Genomic Location: chr16:16452901...16565294
NR annotation: XP_047144886.1, serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000024l.235

ATGAAAGGAAAGGAAGGGAAGGGAAGGGAAATGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAGGATTTGAGGCTGCACTCAGGCTACCATGTAATATGATTCTGGAACGTGAAGTTCCTATCCAAGCTTGGAAATTTTCAATTGATCGAAAGGTAGCAAATGTTACAATTCCTAGTAGCAAAGGTTTAAATATCATACTACCGCAGAACAGCACAGTGACAACGGGAGGTGTAGGGACGCATTACCCAAACAGGATATTTTGTGGTGCTCTGCCTGGCAGTGCAAGCGCCAATGACCTGGCTGAATTCTTCAAAGTCTTTGGCACTGTGCTGGAAGGAAAAGTTGTTCTAGATAACAATGGAAACTCTAGGAGGTTTGGTTTCGTTACTTTTGCAACCAACGACGACGTACAAAGAGTTCTAAGTCATGGTGTAATATTCTTCAGAGGAAAGCAAATAAACGTAGGACCAGCTGTAAAGCGACAGATGCCTGACAACCAACCCAGCATTGTGTATTCGCCAATCAGTGGAAGCCCAAGTCCACCTCTCTCAGTCAATGGAAATCAGATGGCTAATTATCATCCCGTTGGTAATAGAGTGACACCCCCACTGTCCCCATCCCCGCCGATGCCTGGTCAAGGTATTTTGTGTAGAATTGATCAAGTACCTCAAACGACTGTACTGCCAAATATGCAAGTGTCCCCTAACCAAACATACGTACTTCCGTGTCATGGAATGCCTCTACAGACGAACGTCACCAGCCTGCACCAAACATGCACAAATGTTCCGATGCCCCCAACACATAGACTGACGACAAAGGAGATCCTAGATGCAAATGGCAAGCCAAGAGCTGATGTTATCAAAGCACATTTTATTCTGGAAGGGCGTCTTGAAGACGAAGCTGCTCTCAACATCATAAATGAGGGAGCTAACGTTCTGCGGCAAGAGAAGACCATGTTAGACGTGGAAGCACCTATAACTGTTTGCGGTGATATACATGGACAATTCTACGATCTTGTGAAGCTGTTTGAAGTTGGTGGAAACCCAGCAACTACCAGATATTTATTCTTGGGTGACTATGTTGATAGAGGATACTTCTCAATAGAGTGTGTTTTATACCTATGGTCCTTGAAAATATTATATCCAAAAACATTGTTCTTACTGCGTGGAAATCATGAATGCAGACATTTAACCGAATATTTCACTTTCAAAACCGAATGTAAAATCAAATATTCTGAAGCCGTATACGATGCATGTATGGAAGCGTTTGACTGCTTGCCTTTAGCTGCTTTATTGAATCAACAATTCATTTGCCTTCATGGTGGCTTATCACCCGAAATTCACACACTGGACGATGTCAAAAAGATCGATCGATTCAAAGAGCCCCCAGCATTCGGGCCTATGTGTGATATTCTATGGTCAGATCCATTGGAAGATTATGGCAGCGAGAAAACGAATGAGCATTTCTCACACAATAGCGTCAGAGGGTGCTCATACTTCTACAGCTATAGCGCGTGTTGTGATTTTCTACAGCAAAACAATTTGCTTTCAATTATTCGTGCACACGAAGCTCAAGATGCGGGATATCGAATGTATCGAAAAAGTCAAACCACAGGATTCCCATCCCTAATTACGATATTTTCTGCCCCAAATTACCTGGATGTGTACAATAATAAAGCTGCCGTTCTCAAATACGAGAATAACGTGATGAATATTCGACAATTCAATTGCTCTCCTCATCCATACTGGCTTCCAAATTTCATGGATGTTTTCACGTGGTCAATTCCGTTCGTTGGAGAAAAAGTTACTGAGATGCTGGTCAATGTGTTGAGTATTTGCACTGATGAAGAGCTCACTTCAGATGAAGAAGAAGTGGACGAGCAAGCTTCGGCCAAACGCAAAGAGATCATCAAAAATAAAATACGAGCCATTGGCAAAATGGCAAGGGTATTCACTGTTCTCAGGGAAGAAAGTGAGAGCATATTGCAGTTGAAAGGATTAACACCATCCGGTGCTTTGCCCGCTGGCTTACTATCTGGAGGAAAGGATTCCCTTCACTCAGCCTTGAGCGAACTGGCACCTAACCACAAAATTGCTGGATTTGACGAAGCAAAGAGCCTTGACCGAGCGAACGAACGAATGCCCCCACGAAAGCAATCATTAGAACCGAGCAGCATGCCGTCCAAGAGTAAACTTGGTAAAGTTTGA

Transcript

evm.model.ptg000024l.235

Protein

Uniprot

Uniprot term	Description
Q27889	Serine/threonine-protein phosphatase 2B catalytic subunit 2 OS=Drosophila melanogaster OX=7227 GN=Pp2B-14D PE=1 SV=2
Q9VXF1	Serine/threonine-protein phosphatase 2B catalytic subunit 3 OS=Drosophila melanogaster OX=7227 GN=CanA-14F PE=1 SV=4
P63328	Protein phosphatase 3 catalytic subunit alpha OS=Mus musculus OX=10090 GN=Ppp3ca PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006186	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR043360	Family	PP2B	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR041751	Domain	PP2B, metallophosphatase domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45673	SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005955	Cellular Component	calcineurin complex	Interproscan
GO:0033192	Molecular Function	calmodulin-dependent protein phosphatase activity	Interproscan
GO:0097720	Biological Process	calcineurin-mediated signaling	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04348	PPP3C, CNA; serine/threonine-protein phosphatase 2B catalytic subunit	EC:3.1.3.16	Protein phosphatases and associated proteins	ko01009	deepkoala