Detailed information of evm.model.ptg000024l.294 in Aurelia coerulea

Genomic Location: chr16:14993269...15211747
NR annotation: XP_002156904.1, polyadenylate-binding protein 4-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QB54Polyadenylate-binding protein 1A OS=Danio rerio OX=7955 GN=pabpc1a PE=1 SV=1
P29341Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2
Q9EPH8Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00658PABPPoly-adenylate binding protein, unique domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR002004DomainPolyadenylate-binding protein/Hyperplastic disc proteinInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036053Homologous_superfamilyPABC (PABP) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24012RNA BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003730Molecular FunctionmRNA 3'-UTR bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008143Molecular Functionpoly(A) bindingInterproscan
GO:0008266Molecular Functionpoly(U) RNA bindingInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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