Gene detail

Detailed information of evm.model.ptg000024l.361 in Aurelia coerulea

Genomic Location: chr16:13320331...13366820
NR annotation: KAJ7337759.1, hypothetical protein OS493_007913 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.ptg000024l.361

ATGGCCGTCAGGCCGTCTTACTTACTTCTAGGTGTTCTCATTACAAATTTATTATTAGCTACATATGCGAAGCATGTTATCGTAAAGCGAGAATTGATCGAGGACGATGAACCTGTGTCGGACAAATTATCGCTAGACACTATCGAAGATACAGCAGCTTTGAGAAGCCAGCCTCGAAAAAGAGATGTCCTGTTACAGTCGCCTTACACACATGTAGTCTCGCCAGGCAAAATCGTTGACGAAGAAGCCGAGGAAGACGGTGATCCGGATGGGGACAACGAGGCAAGCGGCGATGTTTCGGGCTCAGGGTTTCAACGAGAAATTGTTACCGAAGCAGACGCTGAAGATGCTGATGGAAAGTCGGAAAATGCCGATGAAAATTCTGAAGAATCAAACGCCGATGACGCAAAAAATAGTGAGTCTGGTACTGCAAATGTAGTGTCAGAAACTGCCGGAGCTGAACCTGCAACCGAAGCAAACAAAGAAACGAAACGACAATTTATTGCACATCCACATTCGCGCTTTTACTCGCATCCTGGCTATGTTTACCTGAAAGCACCGCCAATCAGACAAAAAACCATTGTGACTACTCGTATACCAAGGCCACCTATTATGATGTCGTACAAACAGTTCTTACGAAGATTAGCCCACGAACGTACGCATGGTTTTCACGCTCCTTCATATCACGCAGAAGATAGTGATGATGATGATTATGAACATGAACATGAGCACGATGAAGGTAGTCACTGTGAAAGCGATCCATGTATGAATGGCGGAACTTGTAATGAAGTCAGAGATGGCTACGAGTGCATTTGTCCTAATGGATACAAAGGCAGCGATTGTGAAGAGGAAGATCGTTGTCATCCCAATCCATGCCATAACAGCGGTGTTTGCACTGAAGCTAATGGCCAGTATGTGTGCACCTGCCCACAGGGTTTCAAAGGACTCAACTGCCAAGAGTTCAACAAGTGCCAGCCCAATCCATGCCACAATGGTGCAACATGTAACGAAGTCAACAACGATTATGAATGTATCTGTTCTGCTGAATTCACTGGAAAAGATTGTTCAGGAATCAACCATTGTCACATGACTCCATGCTTAAACGGTGGCGTTTGCTCAGCAAATACTGGCATTGGATTTTCTGGTTTAGTTGCGTGTTCATGTCCTCCAGGCTACACTGGACAGAGATGTGAATTTCAAGATCGTTGTCGGTATACGCAGTGCAAAAATGGCGGAAATTGCAGAGATGGTCATTGTGTATGTAATAATGGCTACACTGGTGATTTCTGTGGTGTACCACCATCACCATGCTCGGTATCCCCATGTTTGAATGCCGGTACATGCATGGTCAAATCACTCACTGAATACAGATGCGTTTGCCGCCATGGTTACAGAGGAAACAATTGCGAATTGGAAACACAGTGCTCACCAAATCCATGCCTTAATGTTGGTCAATGCTTAGATGTTGATGATGGATATAAATGCGAATGTGCACACGGATTCAAAGGGCATCATTGTGAAGAGGAAGCGTCGTTGTGTGATGCCAATCCTTGCCTCAACGAAGGAACTTGCTTGAATGAAGTGACAAAATTCAAATGCCTTTGTAAATCAGGATTTAGAGGAGATCATTGTGAAGACATTGATCATTGCCATGACCATCCATGCAAAAATGGAGGATTTTGCCTCTCGGAAGGTGATGATTTCAAATGCAAATGTCTTGACGGCTACAGGGGTCTTCTTTGTGAAGAGCAAGACAGATGCGCAGCGAGTCCTTGCCTCAATGGAGGAACATGCTTTGAAAACCTAGCCGACGTCATGTGCACATGTTCATCAGGGTTTAGAGGAAAATATTGTGAAGAGCGAGATCCTTGCCATCCAAATCCATGTCACCACGACGGAATTTGTTTAGCAGAAGGAGACGATTATCGCTGCACTTGTAATGGAGGTTGGCTTGGCCATTTATGTGAAGATGAAGATAAATGTCATCCAAATCCATGCTTACATGGAGGTGTCTGCGTGTCAAGCGGTGGATCATCATATCAGTGTCATTGTCCAAGTGGATTTATGGGCTCATCATGTGAAGTTGCTTCTGGTGGTATTTCAAGCTTCCATGAGTCCGGTTTAATACACTCAACGGTGCCATGCAGAGAGACACATTATGGTTGTTGTCCTGATGGCGAAACAGCGGCTAACGGTCTTAATGCCCTTGGATGCCCAGCATTCTTCCATCCTTGA

Transcript

evm.model.ptg000024l.361

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan