Detailed information of evm.model.ptg000024l.432 in Aurelia coerulea

Genomic Location: chr16:9809382...9929328
NR annotation: XP_047136671.1, collagen alpha-1(II) chain [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
Q3V0T4Integrin alpha-D OS=Mus musculus OX=10090 GN=Itgad PE=1 SV=1
Q9QYE7Integrin alpha-D OS=Rattus norvegicus OX=10116 GN=Itgad PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00095WAPWAP-type (Whey Acidic Protein) 'four-disulfide core'DomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR008197DomainWAP-type 'four-disulfide core' domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR036645Homologous_superfamilyElafin-like superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0030414Molecular Functionpeptidase inhibitor activityInterproscan

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