Detailed information of evm.model.ptg000024l.46 in Aurelia coerulea

Genomic Location: chr16:20696913...20713113
NR annotation: CAH3182396.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q02874Core histone macro-H2A.1 OS=Rattus norvegicus OX=10116 GN=Macroh2a1 PE=1 SV=5
O75367Core histone macro-H2A.1 OS=Homo sapiens OX=9606 GN=MACROH2A1 PE=1 SV=5
O93327Core histone macro-H2A.1 OS=Gallus gallus OX=9031 GN=MACROH2A1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01661MacroMacro domainDomainInterproscan
PF16211Histone_H2A_CC-terminus of histone H2AFamilyInterproscan
PF00412LIMLIM domainDomainInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR002589DomainMacro domainInterproscan
IPR002119FamilyHistone H2AInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR032454DomainHistone H2A, C-terminal domainInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR035796DomainCore histone macro-H2A, macro domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23430HISTONE H2AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0006342Biological Processheterochromatin formationInterproscan

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